Bioinformatics Scientist Job Description
Bioinformatics Scientist Duties & Responsibilities
To write an effective bioinformatics scientist job description, begin by listing detailed duties, responsibilities and expectations. We have included bioinformatics scientist job description templates that you can modify and use.
Sample responsibilities for this position include:
Bioinformatics Scientist Qualifications
Qualifications for a job description may include education, certification, and experience.
Licensing or Certifications for Bioinformatics Scientist
List any licenses or certifications required by the position: PMI, PMP, SAS
Education for Bioinformatics Scientist
Typically a job would require a certain level of education.
Employers hiring for the bioinformatics scientist job most commonly would prefer for their future employee to have a relevant degree such as Master's and Bachelor's Degree in Bioinformatics, Computer Science, Computational Biology, Biology, Genetics, Statistics, Medical, Molecular Biology, Education, Supervision
Skills for Bioinformatics Scientist
Desired skills for bioinformatics scientist include:
Desired experience for bioinformatics scientist includes:
Bioinformatics Scientist Examples
Bioinformatics Scientist Job Description
- Analyze large-scale genomic data, such next-generation sequencing (Exome, Whole genome and RNA-seq) data from patient samples to support patient stratification and biomarker selection for multiple development programs, focusing on inflammation disease areas
- Interact with Research, Production, and IT staff, may interact with customer support at times
- Coordinate and interact closely with other scientists on data quality and file management
- Interact with Research, Production, and IT staff, customer support at times
- Build robust and scalable software
- Data analysis -- apply best practice statistical/computational methods to analyze large-scale biological data, such as gene expression, copy-number, mutation, methylation, NextGen sequencing, GWAS
- Mine the Affymetrix Genomic database for markers and probes that meet the customer design requirements
- Assisting Engineering and Production with sequencing analysis, interpretation, spec setting, trending, troubleshooting, and improvement
- Working with Process Engineering, Quality, Suppliers, and Customer Support to troubleshoot production line issues related to consumable performance
- Working as part of a team to envision and deploy a scalable architecture for analysis, performance trending, and monitoring
- Applied analysis of sequencing data and/or modelling of physical, chemical or abstract systems
- Proficiency in using Python or R for data analysis
- Ability to work in both independently or as part of a team
- Able to prioritize tasks and work concurrently on multiple projects
- Expert knowledge on current bioinformatics/genomics/proteomics resources available at NCBI, Ensembl, UCSC, Broad Institute, Familiarity with HLA genotyping databases such as IMGT
- Analysis of sequencing and/or microarray based data
Bioinformatics Scientist Job Description
- Develop, refine, and operate next-generation sequencing (NGS) pipelines and tools to streamline bioinformatics processes, data analysis, and visualization
- Design specifications of NGS/Whole Genome Mapping based applications
- Evaluate NGS/Whole Genome Mapping based applications
- Productivity working in an interdisciplinary team environment
- US citizenship or permanent residency status (green card) is required
- Integrate bioinformatics, genetics, metabolomics, structural biology, computation, and enzymology
- Design molecular or microbial laboratory experiments, oversee execution, interpret results
- Work in enzyme/pathway discovery as part of a multidisciplinary program
- Generate insights and evidence that link tumor genetics with longitudinal treatment and outcomes data
- Develop databases for handling genetic perturbation data emerging from systematic mutagenesis approaches
- 2+ years of programming experience with both compiled (Java preferred) and interpreted (Python strongly preferred) languages
- Proficiency in multiple languages such as Python, Perl, R, Java, C++, and/or C#
- Scientific background in microbiology or metagenomics
- Sufficient familiarity with the paper publication process and associated experimental design requirements
- Previous experience in distributed and parallel processing, working in a cloud environment
- Knowledge of databases (SQL, noSQL, graph ) and database design needed, Oracle DB experience desired
Bioinformatics Scientist Job Description
- Develop and maintain units tests for implemented software
- Develop and maintain documentation for implemented software
- Develop and publish tutorial materials for implemented data analyses pipeline
- Work with LCLS and other large scale facilities’ software teams for distribution of developed software
- Apply existing and/or new methods to large-scale next-generation sequencing datasets generated within a wide range of cohorts in international projects
- Development of new applications and tools for the analysis of "omics" data with a focus on proteomics and metabolomics
- Perform QA/AC on customer data
- Generate reports on the results of customer data
- Maintain and support LIMS and Data Archive
- Speak to customers regarding their data
- Proficiency using R and Bioconductor packages, and programming language (Python, Perl, and Javascript)
- Due to the collaborative and interdisciplinary nature of this research, strong communication skills and the ability to work both independently and in a group setting with multiple investigators are critical
- PhD in Computer Science, Bioinformatics, Computational Biology or related quantitative field
- 5+ years’ experience in efficient pipeline/workflow development for large next-generation sequencing data analysis
- Experience with high performance cluster computing queuing systems such as SGE, Torque
- Strong in database system internals, parallel processing, search, algorithms, GPU processing
Bioinformatics Scientist Job Description
- Support faculty and students in adapting computational strategies to the specific features of the HPC infrastructure
- Develop software and methods to explore, analyze and visualize biological data sets including genomic, imaging and protein structure data
- Participate in the design and execution of collaborative research studies in biomedical informatics
- Act as a liaison between the software development team and sales/marketing team
- Developing and reviewing product data sheets and other product literature for distribution to sales and marketing personnel and customers
- Conduct technical product training on instruments and applications for customers and sales staff
- Researching, evaluating, and recommending new generation products, features, and specifications
- Participating in new product launches
- Generate and Review technical data for advertising, proof statements, journal publications, and other types of documentation
- Assist with technical support and application issues
- Expert in Perl or Python, R, shell scripting, and/or C/C++/C#
- Additionally, the Bioinformatics Scientist must work effectively as a member of an interdisciplinary team consisting of biologists, chemists, mathematicians, statisticians and engineers
- This position involves daily interaction with researchers and faculty
- Familiarity with compute clusters and scheduling systems
- Master’s Degree with 3+ years experience or PhD or equivalent in Bioinformatics, Cancer Biology, or a related field
- 1+ years of programming experience with Python (preferred) or another interpreted language
Bioinformatics Scientist Job Description
- Independently troubleshooting and fixing of bioinformatic related problems
- Preparing and maintaining programmatic and data analysis documentation
- Consulting with Principal Investigators on aspects of experimental design, data acquisition, analysis and related aspects of research plan development
- Providing technical advice to Principal Investigators in the development of research proposals to federal, state and private agencies and foundations
- Collaborating with the Core laboratory Genomics Scientist and other laboratory staff to convey and assist in resolving problems associated with data generation
- Completing assigned tasks in a timely manner
- Maintaining current knowledge of computational biology, bioinformatics, and methods of data analysis
- Reviewing scientific literature
- Actively participating in relevant professional societies and organizations
- Disseminating results by publication in peer-reviewed journals
- Scripting language such as Perl, or Python
- Strong background in developing software with multiple languages and multiple platforms
- Personal initiative and ability to work effectively as part of a team
- Familiarity with applying statistical approaches to algorithm development
- Basic knowledge of genomics, genetics, and sequencing technologies
- 2+ years of experience with performing data analysis